Bioconductor Gene significance

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WGCNA co-expression analysis gene significance module membership module-trait relationship

updated 3.7 years ago by annamariabugaj ▴ 10 • written 6.4 years ago by rodrigo.duarte88 ▴ 40

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wgcna module membership gene significance

updated 6.9 years ago by Peter Langfelder ★ 3.0k • written 6.9 years ago by neber • 0

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Comment: Error message that there is no package called Biobase by DamionLedner99 • 0

thanks for sharing!!! https://cran.r-project.org/

Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

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A: DESeq2 normalization vs VST vs rlog

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